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3d analysis  (Oxford Instruments)


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    Structured Review

    Oxford Instruments 3d analysis
    3d Analysis, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44474 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/3d+analysis/Imaris/pmc13123337-285-33-36
    Average 99 stars, based on 44474 article reviews
    3d analysis - by Bioz Stars, 2026-11
    99/100 stars

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    Related Articles

    other:

    Article Title: Actomyosin-II Protects Axons from Degeneration Induced by Mild Mechanical Stress
    Article Snippet: - The length of the axons used for 3D analysis in Imaris ranged from 200 to 250 μm.

    Article Title: Spatiotemporal remodeling of chromatin topology architecture and H3K27me3 redistribution underlies vascular pathology in Hutchinson-Gilford progeria syndrome
    Article Snippet: 3D analysis was performed in Imaris.

    Multiplex Assay:

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge.
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris 17–19 A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification (Figure 5). ..

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris , , A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification ( ). ..

    Staining:

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge.
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris 17–19 A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification (Figure 5). ..

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris , , A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification ( ). ..

    Microscopy:

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge.
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris 17–19 A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification (Figure 5). ..

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris , , A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification ( ). ..

    Selection:

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge.
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris 17–19 A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification (Figure 5). ..

    Article Title: Protocol for visualization and quantitative analysis of murine lung immunological architecture using iBALT-UNMAP following bacterial challenge
    Article Snippet: .. Slides are multiplex stained for nuclei, B220, CD3, and GL7 using the sequential TSA-based protocol, then imaged on a widefield epifluorescence system for screening and on a spinning disk confocal microscope for quantitative 3D analysis in Imaris , , A consistent, blinded workflow for field selection, acquisition, and batch analysis is critical for reproducible iBALT quantification ( ). ..

    Expressing:

    Article Title: Satellite microglia: marker of traumatic brain injury and regulator of neuronal excitability.
    Article Snippet: .. In human tissues, images were used to quantify the number of neurons with satellite microglia, perform 3D analysis in Imaris as described below, and identify the percentage of neurons close to and away from microglia with positive cfos expression. ..

    Article Title: Satellite microglia: marker of traumatic brain injury and regulator of neuronal excitability
    Article Snippet: .. In human tissues, images were used to quantify the number of neurons with satellite microglia, perform 3D analysis in Imaris as described below, and identify the percentage of neurons close to and away from microglia with positive cfos expression. ..

    Software:

    Article Title: A comparison of microglial morphological complexity in adult mouse brain samples using 2-dimensional and 3-dimensional image analysis tools
    Article Snippet: .. However, in terms of time, these options still take decidedly longer to analyze cells in 3D compared to software built for 3D analysis, like Imaris, especially considering batch analysis capabilities, where analysis parameters can be applied to multiple images at a time. .. For example, manually tracing neurons from the Drosophila larvae took an average of 21 min per image, whereas Imaris had an average tracing time of 7 min per image (Nguyen and Thompson-Peer, 2021).



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